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The huge elephant in the (White House briefing) room regarding swine flu

I have watched the White House press briefing three times now. There are some things which stood out for me.

Encapsulated: We do not know if we are watching the first infant signs of an epidemic, or if by some strange stroke of Fate we are already experiencing the "first wave" of an epidemic or pandemic. We have not tested enough people prior to April 1 to get a handle on that answer. No one has.

Why not? Simply, the symptoms were not severe enough for anyone to suspect that another strain of influenza was at work -- at least, not until Mexicans started dropping dead in significant numbers. Then, and only then, did the next, more sophisticated level of testing take place.

In 2009, it is (regrettably) common for people not to be tested for influenza if they go to their family doctor. I, for example, have never been swabbed for flu -- and I have had several different doctors treat me for different respiratory ailments over the past two decades. If you don't swab, you can't test. If you don't test, you can't type.

It is this lack of serious illness that worries us in Egypt, and in Indonesia, and in other regions where H5N1 has become endemic. There is absolutely no way to determine the level of penetration of a virus without testing blood for antibodies. This is precisely the exercise the Egyptian government and the WHO are collaboratively taking with human samples -- to look for antibodies to avian H5N1 and to see if the disease has asymptomatic carriers.

We won't know if this swine variant has been with us for awhile until many months from now.

I am wondering if the comment from DHS about the number of swine flu cases abating, and then picking up again after a few weeks, is actually code for the USanticipating a wave of a pandemic. This would make sense if you view the big picture of the US response. The increased surveillance is obviously meant to see how widespread and how rapidly the virus is moving. The pre-positioning of antivirals is not just to be ready to treat mildly sick Americans -- it is also meant to quickly treat deathly ill Americans in case the virus evolves quickly and begins to attack with as much lethality as it appears is currently taking place in Mexico.

Let me take you back to 1918.Back then, the prevailing opinion was that flu was a bacteria and not a virus. Also, influenza was not a "reportable disease" like it is now. There were many, many cases and a lot of deaths, but nothing near what was to come.

It was the second wave that got everyone's attention. And then the third and final wave came, which was milder than the second but worse than the first. Then H1N1 settled into the lexicon of seasonal viruses.

Let's look at the current rate of deaths in Mexico. A quick bit of calculus can tell us how many cases may be underreported in Mexico. If we look at 80 deaths and 1400 cases, we see the Case Fatality Rate (CFR) somewhere between 5 and 6 percent. If the CFR were something much more reasonable -- say, 1% -- then we are looking at some 8,000 cases.

Influenza's goal is not to kill its hosts. It is to coexist with its hosts. Even the 1918 pandemic's CFR was somewhere between 2 and 2.5% of those infected. Still, if the CFR in Mexico is at 1%, then the virus is far more widespread and the chances for an epidemic are magnified exponentially.

Also, the fact that young adults are dying is the worst news within this current onslought of reports. These people just are not traditionally ill. Only testing and autopsies will tell us if the dreaded "cytokine storm" of immune overload is at work here.

People will remind you that there is a ton of respiratory disease and malaise in Mexico. I would counter that we have a whole new subclass of Americans -- immunocompromised Americans with HIV/AIDS, cancer patients undergoing chemotherapy, and other autoimmune diseases. These people especially need to stay very, very close to what is taking place right now.

Regarding the release of antivirals from the SNS: I was fascinated to see the military preposition Tamiflu so quickly (some 7 million courses, or 700,000 boxes of ten capsules). This action tells me that the federal government is itself unsure if this is an early outbreak, or if surveillance broke down and we are a lot further along in this episode than anyone realizes. The absence of data is so glaring, and there is not a doggone thing anyone can do about it until we have more data, better data and good sequencing of the genes of this new virus.

That is key. Labs such as St. Jude need to see this new virus, and see the Mexican clade that is killing people, and see if it is antigenitically the same, or if a mutation occurred that would make the virus more lethal than its American counterpart. In my opinion, this will ultimately decide if borders close, or if travel is curtailed.

This opinion appears to be shared by the WHO itself, in the person of one Keiki Okuda. Here is an excerpt from anew article from Sky News:

Swine Flu Could Become More Dangerous

The swine flu virus that has killed more than 80 people in Mexico may mutate into a "more dangerous" strain, the World Health Organisation has warned. Skip related content

"It's quite possible for this virus to evolve... when viruses evolve, clearly they can become more dangerous to people," said Keiji Fukuda, of the global health watchdog.

Mr Fukuda also called for international vigilance as health experts wait to see whether the virus will turn into a worldwide pandemic.

Over 1,300 people are now thought to have contracted the virulent H1N1 swine influenza after it mutated into a form that spreads from human to human.

The Mayor of New York has confirmed that eight school children are suffering mild symptoms after becoming infected.

And there have been at least 12 other confirmed cases in Texas, Ohio, California and Kansas.

The White House has declared a public health emergency but told the public "not to panic".

Sky US correspondent Greg Milam said: "It's important to realise that those affected have only had mild symptoms, and all have recovered or are recovering.

"But the authorities do believe that this outbreak will get worse."

Canada has become the third country to confirm human cases of swine flu with six people falling ill in Nova Scotia and British Columbia.

Elsewhere in the world, suspected cases have been reported in France, Spain, Israel, New Zealand and the UK.

In France, two people who had returned from Mexico with fevers are being monitored in regions near the port cities of Bordeaux and Marseille.

A 26-year-old Israeli man has also been admitted to hospital after returning from a trip to Mexico with flu-like symptoms.

In Auckland, 10 school children have tested positive for influenza after returning from Mexico.

In the UK, two people have been admitted to a hospital in Scotland after returning from Mexico last week.

They are said to have mild flu-like symptoms but their condition is not causing concern.

Mexican City Mayor Marcelo Ebrard said two more people have died of the virus, taking the death toll to 83.

Overall, I am impressed with the acting head of the CDC, Dr. Richard Besser. He evokes confidence and I think he is believable. Why? Well, for one reason, he wanted to pounce on certain questions and had to restrain his movement until his "handler" -- the White House press secretary -- either gave him a nod ormotioned him toward the podium with a deferential wave of his hand. If this press conference was his audition for the top job at CDC, I think he passed.

Reader Comments (10)

Scott, for a bit of conspiracy, let me toss this idea in the ring: How do we know that the Mexican Flu did not start out in America? After all, we have had a milder form of the illness here. What is happening in Mexico is far worse in terms of lethality. Would not this indicate that the gene mutated somewhere between the USA and Mexico. Now the virus is fatal. Just a thought.

I am not a pathologist, but viruses tend not to get weaker, but stronger, until they burn out. The fact that the only deaths have been in Mexico suggests that there is a stronger variant of the virus in Mexico. Again, that is my lay-opinion.

April 26, 2009 | Unregistered CommenterTimothy Carr

Funny you should mention that. A reader at my COmputerworld blogsite asked that question, and it was dismissed out-of-hand. However, today I also downloaded the 2005 report of the triple-reassortant swine flu H1N1 virus they discovered in Wisconsin. It is not impossible that the Mexican outbreak is American-made. But it will take a lot of sequencing to determine that. That may never be known. The viral detectives will unravel that soon, I hope.

April 26, 2009 | Registered CommenterScott McPherson

Well, that is not exactly where I was headed, although that is also an intriguing idea. In fact, I was thinking back to Baxters Labs in Austria, and that strange "mishap" that allowed some live Avian flu culture to somehow mistakenly get mixed in with some vaccines. http://www.naturalnews.com/025760.html

18 countries received this batch. A few months later, those shipments could be anywhere.

April 26, 2009 | Unregistered CommenterTimothy Carr

For clarification, I know that the tainted shipments were supposedly caught in time, but what if one wasn't caught? I know I am just being a paranoid nutcase. I am almost to the point of dismissing my own comments myself, because the more I hear myself say it the crazier it sounds even to me. I will shut up now :)

April 26, 2009 | Unregistered CommenterTimothy Carr

Building on what the first poster surmised, that the virus might have been brewing here, then moved to Mexico: could have the late season cases of seasonal flu in Mexico and the US actually been unknown and undiagnosed swine flu? How would that affect the scenario? Do current flu tests identify a flu strain other than to differentiate Type A and Type B?

My family was hit hard in late March by Type A flu after all of us having had the flu vax in Nov/Dec 08. We were told that the vaccine was a good match for Type A this year, so it was curious (and alarming) to me that 3 out of 5 of us contracted it. The kids got a somewhat milder and shorter-lived version, while my husband (aged 37) thought for sure he was going to die. So now I'm wondering if it could have been this new virus. I simply don't know if the lab assumed it was seasonal flu when the test revealed the kids had Type A. I'm almost inclined to call the pediatrician and tell him to look at the lab reports again but I don't want to be a crazy.

April 26, 2009 | Unregistered CommenterAmy

Amy, I don't think at this point anything can be taken for granted. I would call the pediatrician who treated you guys. Yes, its very odd that your flu vaccine was not helpful.

April 26, 2009 | Unregistered CommenterTimothy Carr

I just found this: http://www.wired.com/dangerroom/2009/04/ft-detricks-bug

All I am saying is that there certainly seems to have been a lot of "mishandling" of viruses lately.

April 27, 2009 | Unregistered CommenterTimothy Carr

This post is brilliant, m'dear! You described exactly what I suspect. By NOT testing for a strain, how can the CDC possibly know what is brewing until it rears into virulent obviousness? Remember the researcher in Africa who is testing bushmeat for viruses so he can spot a new virus BEFORE it explodes? - a good idea yes? - test often enough and you'll more likely to catch these rare but severe creatures.

Our public health system is set up just like the AMA - wait until something falls off before taking action. And then bring out the powerful guns. Otherwise, it's let's wait and see if it gets better. I now know I had it. Twenty pound baby on my chest... exactly! And I beat it within the first day. And I'll bet that my friends and family who are currently ill or have been over the past month have had it too. The game's afoot! (I too love theatrical icons; the 24 simile was amusing)

Yes Amy, doctors RARELY test for the strain of one's flu. It's AMA standard to just assume you have what's going around. But if they should decide to test, they use the inexpensive, simple test that shows only A or B or unknown. Only the PCR, much more expensive and has to be sent to the state lab usually, can illuminate a new strain. It's only when people who shouldn't die do and in surprising numbers that the red flag goes up.

One more thing Scott. I have a theory and you were almost onto it in this post. Viruses are in league with bacterial hoodlums. Could this be the difference in virulence? The unique colonies in the respiratory tissues of the population - Indonesia? Mexico? Shouldn't they test the bacterial colonies as well as the viral? Dare I mention MRSA here?

April 27, 2009 | Unregistered Commenterphytosleuth

I was preparing another entry in my series "When labs attack" when this swine business flamed up. It will include the Baxter debacle and the Hong Kong Scratch.

April 27, 2009 | Registered CommenterScott McPherson

Scott, way to check for whether genetic makeup is similar or same as lab strains?
http://www.ncbi.nlm.nih.gov/genomes/FLU/FLU.html

April 27, 2009 | Unregistered Commenterphytosleuth

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